Synthetic Peptide Analysis 

Synthetic Peptide Analysis 

Waters provides leading solutions for lab-scale purification, characterization, and monitoring of synthetic peptides including GLP-1 agonists and cyclic peptides and their impurities across the product lifecycle. Flexible and robust LC-UV and LC-UV/MS workflows meet the analytical needs of modern laboratories, accelerating product development while ensuring peptide drug quality and safety.

Waters provides leading solutions for lab-scale purification, characterization, and monitoring of synthetic peptides including GLP-1 agonists and cyclic peptides and their impurities across the product lifecycle. Flexible and robust LC-UV and LC-UV/MS workflows meet the analytical needs of modern laboratories, accelerating product development while ensuring peptide drug quality and safety.

Peptide Mapping
Peptide Mapping

Overview

Synthetic peptides have become one of the fastest growing market sectors in the pharmaceutical and biopharmaceutical industries, with greater efficacy, safety, and tolerability than many small molecule drugs. Understanding structure and impurities is key to ensuring critical quality and safety standards are met. With Waters workflow-based solutions for lab-scale purification, characterization, and monitoring of synthetic peptides and their impurities, your lab has the user-friendly tools to improve drug development and manufacture.


Desmopressin synthetic peptide molecule structure

Applications

Glucagon-like peptide 1 (GLP-1) agonists, originally developed to target diabetes, have gained significant momentum for weight loss. Regardless of indication, purification, characterization, and monitoring of these molecules is critical to achieve a safe and efficacious therapeutic.

Glucagon-like peptide 1 (GLP-1) agonists, originally developed to target diabetes, have gained significant momentum for weight loss. Regardless of indication, purification, characterization, and monitoring of these molecules is critical to achieve a safe and efficacious therapeutic.


Exenatide diabetes drug molecule


Primer: Practical Approaches to Peptide Isolation

Synthetic peptides offer unique challenges in the development of an isolation method. For future studies, purity and target peptide yield are critical factors which influence experimental results. This primer will discuss the principles of peptide isolation along with method development considerations including mass-directed purification.

Synthetic peptides offer unique challenges in the development of an isolation method. For future studies, purity and target peptide yield are critical factors which influence experimental results. This primer will discuss the principles of peptide isolation along with method development considerations including mass-directed purification.


Waters partners with a variety of instrument vendors for the versatility you need for your business.

Solutions


Waters systems are ideal for the convenient lab-scale purification, characterization, and monitoring of synthetic peptides and their impurities.

Waters systems are ideal for the convenient lab-scale purification, characterization, and monitoring of synthetic peptides and their impurities.

The universal platform for liquid chromatography

The universal platform for liquid chromatography

Combining state-of-the-art column and system technology, MaxPeak Premier Solutions are designed specifically to eliminate the unpredictability of analyte losses due to metal interactions.

  • Synthetic Peptide Analysis
  • Peptide Purification
  • Analysis of GLP-1

Routine biopharmaceutical analysis – accessible and accelerated 

Routine biopharmaceutical analysis – accessible and accelerated 

Make better and faster decisions, maximize organizational efficiency, and directly measure multiple synthetic peptide quality attributes with the BioAccord LC-MS System.

  • Synthetic Peptide Analysis
  • Analysis of GLP-1

Complete coverage for confident characterization

Complete coverage for confident characterization

Maximize sample information for your analytes from detailed characterization to accurate quantitation with the Xevo G3 QTof, which enables complete confidence in your results.

  • Synthetic Peptide Analysis
  • Analysis of GLP-1

Delivering cutting-edge analytical performance

Delivering cutting-edge analytical performance

Obtain ultimate flexibility with the SYNAPT XS Mass Spectrometer that offers greater freedom of analytical choice to support scientific creativity and technical success for any application.

  • Synthetic Peptide Analysis
  • Analysis of GLP-1

Separate beyond question with the power of mass detection

Separate beyond question with the power of mass detection

Monitor peptide drug product quality efficiently and minimize the risk of unexpected components cost-effectively using the ACQUITY QDa II Detector in your workflow.

  • Synthetic Peptide Analysis
  • Peptide Purification
  • Analysis of GLP-1

Designed for the routine, prepared for the unexpected

Designed for the routine, prepared for the unexpected

Obtain simple mass detection ideally suited to qual/quan applications with the SQ Detector 2, an advanced benchtop single quadrupole mass detector designed for high performance LC-MS applications that offers a wide range of ionization options including APPI and ASAP.

  • Synthetic Peptide Analysis
  • Peptide Purification
  • Analysis of GLP-1

Purify your compounds with confidence

Purify your compounds with confidence

Achieve flexible, scalable preparative LC configurations with the specificity of mass-directed purification or inclusiveness of UV detection with Waters Purification Systems.

  • Synthetic Peptide Analysis
  • Peptide Purification
  • Analysis of GLP-1


The data speaks for itself

The data speaks for itself
UPLC is used for pilot-scale analysis because it is best able to chromatographically resolve the peak of interest, a 1500 Da synthetic peptide, from its related impurities. UPLC is used for pilot-scale analysis because it is best able to chromatographically resolve the peak of interest, a 1500 Da synthetic peptide, from its related impurities.
Optimizing the gradient segment for peptide analysis. The synthetic peptide was separated with UPLC at a gradient slope of 3%/column volume over 8% segments beginning at 28, 30, and 33%. Optimizing the gradient segment for peptide analysis. The synthetic peptide was separated with UPLC at a gradient slope of 3%/column volume over 8% segments beginning at 28, 30, and 33% acetonitrile. Separations were monitored with UV at 214 nm.
Optimized separation of synthetic peptide eledoisin with orthogonal mass detection Optimized separation of synthetic peptide eledoisin with orthogonal mass detection. 1A) UV detection at 215 nm. Using the MassLynx integration tool, 11 impurity peaks were identified and annotated with their retention time and area. Peaks above 0.2% area are labeled in blue, otherwise in red. 1B) MS detection by ACQUITY QDa Detector.
Synthetic peptide separation of eledoisin from its process-related impurities. 1A) Optical detection of eledoisin with inset showing impurities. 1B) Corresponding QDa data. Inset shows strong visual correlation to optical data. Synthetic peptide separation of eledoisin from its process-related impurities. 1A) Optical detection of eledoisin with inset showing impurities. 1B) Corresponding QDa data. Inset shows strong visual correlation to optical data.
Representative chromatogram of method performance for both MaxPeak HPS Technology and traditional stainless-steel systems for semaglutide. Representative chromatogram of method performance for both MaxPeak HPS Technology and traditional stainless-steel systems for semaglutide.  MaxPeak HPS Technology provided a 20% increase in peak area and 30% increase in peak height compared to traditional stainless steel column hardware.
Example chromatograms of daptomycin and dalbavancin run on the Arc Premier featuring MaxPeak HPS Technology (trace in black) vs ACQUITY Arc Systems featuring traditional stainless steel (trace in blue). Example chromatograms of daptomycin and dalbavancin run on the Arc Premier featuring MaxPeak HPS Technology (trace in black) vs ACQUITY Arc Systems featuring traditional stainless steel (trace in blue). A significant increase in chromatographic peak area and height can be seen on the Arc Premier System in combination with XSelect Premier Peptide CSH C18 columns.

Webinars and Resources



  • Application Notebook

Peptide Separations Analyses of Biotherapeutic Peptides Chapter

Peptide Separations Analyses of Biotherapeutic Peptides Chapter
  • Brochure

Providing Efficient and Reliable Solutions for Synthetic Peptide Purification

Providing Efficient and Reliable Solutions for Synthetic Peptide Purification
  • Poster

Principles and Practice Using SEC for Reliable Biotherapeutic Peptide Analysis

Principles and Practice Using SEC for Reliable Biotherapeutic Peptide Analysis
  • Poster

Characterizing Quality Attributes of GLP-1 Analogs by Light Scattering

Characterizing Quality Attributes of GLP-1 Analogs by Light Scattering
  • On Demand Webinar

Development of Reversed-Phase Methods for the Analysis of Biotherapeutic Synthetic Peptides including GLP-1 Agonists

Development of Reversed-Phase Methods for the Analysis of Biotherapeutic Synthetic Peptides including GLP-1 Agonists
  • User Manuals

XBridge Peptide BEH C18, 130Å and 300Å Columns and XBridge Premier Peptide BEH C18, 130Å Columns Care and Use Manual

XBridge Peptide BEH C18, 130Å and 300Å Columns and XBridge Premier Peptide BEH C18, 130Å Columns Care and Use Manual
  • User Manuals

XSelect Peptide CSH C18, 130Å, 3.5 μm and 5 μm Columns Care and Use Manual

XSelect Peptide CSH C18, 130Å, 3.5 μm and 5 μm Columns Care and Use Manual
  • Wall Chart

Waters Columns, Analytical Standards & Reagents Selection Guide Wall Chart

Waters Columns, Analytical Standards & Reagents Selection Guide Wall Chart

Related

Achieve unmatched resolution of complicated protein digests, exceptional glycopeptide resolution, and shorter analysis times with UPLC separations and optimally selective and resolving peptide separation chemistries.


Learn more about Synthetic Peptide Analysis Solutions.

Learn more about Synthetic Peptide Analysis Solutions.

Peptide Mapping